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DOI :10.26650/JARHS2021-1135821   IUP :10.26650/JARHS2021-1135821    Tam Metin (PDF)

DATA SCIENCE, CANCER AND SEQUENCING ANALYSES

Mehmet Baysan

Recent developments in technology led to exponential growth in processing speed, storage capacities and communication rates. These available resources allowed the creation of thousands of applications that run on smart devices and the world wide web. Today we generate lots of data using these applications and the availability of vast digital data created a new field: data science. Data science aims to utilize digital data to develop solutions to improve human life. Next-generation sequencing technologies enabled the generation of high-throughput genomic data from DNA and RNA. Considering the great potential for genomic data to understand biological functions and the substantial drop in sequencing costs; the amount of available data increased exponentially over time. Sequencing technologies are based on the shredding of the DNA and capture of short reads. These reads are then combined to identify the genomic map of the biological sample. Some of our studies are based on extraction of multiple samples from a tumor and application of sequencing on these samples to understand the tumor development, progression and drug response. Unfortunately, all the frequently used analysis algorithms are based on optimistic assumptions. High level of disparity is observed in literature and in our studies when we compare different algorithms. Currently, we do extensive testing on realistic scenarios to understand the sources of variation in the results. Finally, we develop a user-friendly analysis platform for comparative sequencing analyses to enhance the cooperation among scientists with different backgrounds on sequencing projects.


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    APA

    Baysan, M. (2022). DATA SCIENCE, CANCER AND SEQUENCING ANALYSES. Sağlık Bilimlerinde İleri Araştırmalar Dergisi, 5(1), 21-21. https://doi.org/10.26650/JARHS2021-1135821


    AMA

    Baysan M. DATA SCIENCE, CANCER AND SEQUENCING ANALYSES. Sağlık Bilimlerinde İleri Araştırmalar Dergisi. 2022;5(1):21-21. https://doi.org/10.26650/JARHS2021-1135821


    ABNT

    Baysan, M. DATA SCIENCE, CANCER AND SEQUENCING ANALYSES. Sağlık Bilimlerinde İleri Araştırmalar Dergisi, [Publisher Location], v. 5, n. 1, p. 21-21, 2022.


    Chicago: Author-Date Style

    Baysan, Mehmet,. 2022. “DATA SCIENCE, CANCER AND SEQUENCING ANALYSES.” Sağlık Bilimlerinde İleri Araştırmalar Dergisi 5, no. 1: 21-21. https://doi.org/10.26650/JARHS2021-1135821


    Chicago: Humanities Style

    Baysan, Mehmet,. DATA SCIENCE, CANCER AND SEQUENCING ANALYSES.” Sağlık Bilimlerinde İleri Araştırmalar Dergisi 5, no. 1 (Dec. 2022): 21-21. https://doi.org/10.26650/JARHS2021-1135821


    Harvard: Australian Style

    Baysan, M 2022, 'DATA SCIENCE, CANCER AND SEQUENCING ANALYSES', Sağlık Bilimlerinde İleri Araştırmalar Dergisi, vol. 5, no. 1, pp. 21-21, viewed 5 Dec. 2022, https://doi.org/10.26650/JARHS2021-1135821


    Harvard: Author-Date Style

    Baysan, M. (2022) ‘DATA SCIENCE, CANCER AND SEQUENCING ANALYSES’, Sağlık Bilimlerinde İleri Araştırmalar Dergisi, 5(1), pp. 21-21. https://doi.org/10.26650/JARHS2021-1135821 (5 Dec. 2022).


    MLA

    Baysan, Mehmet,. DATA SCIENCE, CANCER AND SEQUENCING ANALYSES.” Sağlık Bilimlerinde İleri Araştırmalar Dergisi, vol. 5, no. 1, 2022, pp. 21-21. [Database Container], https://doi.org/10.26650/JARHS2021-1135821


    Vancouver

    Baysan M. DATA SCIENCE, CANCER AND SEQUENCING ANALYSES. Sağlık Bilimlerinde İleri Araştırmalar Dergisi [Internet]. 5 Dec. 2022 [cited 5 Dec. 2022];5(1):21-21. Available from: https://doi.org/10.26650/JARHS2021-1135821 doi: 10.26650/JARHS2021-1135821


    ISNAD

    Baysan, Mehmet. DATA SCIENCE, CANCER AND SEQUENCING ANALYSES”. Sağlık Bilimlerinde İleri Araştırmalar Dergisi 5/1 (Dec. 2022): 21-21. https://doi.org/10.26650/JARHS2021-1135821



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