Research Article


DOI :10.26650/EurJBiol.2022.1058174   IUP :10.26650/EurJBiol.2022.1058174    Full Text (PDF)

Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells

Bengü Ergüden

Objective: Fungi are invasive species responsible for infections in many people around the world and which severely affect the immune system. The opportunistic pathogenic species, such as Candida species and Aspergillus fumigatus, can cause death in people with weakened immune systems. Natural medicines derived from plants are often used to treat fungal diseases. In connection with our efforts to unearth possible cellular targets of antimicrobial agents, in this study, we aimed to determine the functional consequences of benzyl alcohol treatment on the nuclear membrane. Materials and Methods: We analysed the nuclear membrane distortions caused by benzyl alcohol in Saccharomyces cerevisiae cells using Nup49-GFP reporter strain. We also studied cellular distributions of various fluorescently tagged nuclearcytoplasmic shuttling proteins to determine any functional disturbances in nuclear pore complexes upon benzyl alcohol treatment. Localization of 51.5 kDa protein LexA-NES-GFP and 61.8 kDa protein Pho4(Δ157-164)-GFP to the nucleus in yeast cells was key for evaluating the effect upon diffusion limit of pores. Results: By analyzing the distribution of fluorescently tagged nuclear localization signal or nuclear export signals bearing reporter proteins between the nucleus and cytoplasm, we have shown that the nuclear membrane becomes leaky upon benzyl alcohol treatment. Conclusion: The diffusion limit across the nuclear membrane in yeast cells is increased upon benzyl alcohol treatment. We believe that these findings not only increase our understanding of the mode of action of benzyl alcohol bearing antifungal agents, but also help widening their use.


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References

  • 1. D’Angelo MA and Hetzer MW. The role of the nuclear envelope in cellular organization. Cell Mol Life Sci 2006; 63: 316-32. google scholar
  • 2. Cook A, Bono F, Jinek M, Conti E. Structural biology of nucleocyto-plasmic transport. Annu Rev Biochem 2007; 76: 647-71. google scholar
  • 3. Yang Q, Rout MP, Akey CW. Three-dimensional architecture of the isolated yeast nuclear pore complex: functional and evolutionary implications. Mol Cell 1998; 1: 223-34. google scholar
  • 4. Rout MP, Aitchison JD, Suprapto A, Hjertaas K, Zhao Y, Chait BT. The yeast nuclear pore complex: composition, architecture, and trans-port mechanism. J Cell Biol 2000; 148: 635-51. google scholar
  • 5. Cronshaw JM, Krutchinsky AN, Zhang W, Chait BT, Matunis MJ. Proteomic analysis of the mammalian nuclear pore complex. J Cell Biol 2002; 158: 915-27. google scholar
  • 6. Reichelt R, Holzenburg A, Buhle EL Jr, Jarnik M, Engel A, Aebi U. Correlation between structure and mass distribution of the nucle-ar pore complex and of distinct pore complex components. J Cell Biol 1990; 110: 883-94. google scholar
  • 7. Mosammaparast N, Pemberton LF. Karyopherins: from nucle-ar-transport mediators to nuclear-function regulators. Trends Cell Biol 2004; 14: 547-56. google scholar
  • 8. Mansfeld J, Guttinger S, Hawryluk-Gara LA, Pante N, Mall M, Galy V, Haselmann U, Muhlhausser P, Wozniak RW, Mattaj IW, Kutay U, Antonin W. The conserved transmembrane nucleoporin NDC1 is required for nuclear pore complex assembly in vertebrate cells. Mol Cell 2006; 22: 93-103. google scholar
  • 9. Stavru F, Hulsmann BB, Spang A, Hartmann E, Cordes VC, Görlich D. NDC1: a crucial membrane-integral nucleoporin of metazoan nuclear pore complexes. J Cell Biol 2006; 173: 509-19. google scholar
  • 10. Schwartz TU. Modularity within the architecture of the nuclear pore complex. Curr Opin Struct Biol 2005; 15: 221-6. google scholar
  • 11. Alber F, Dokudovskaya S, Veenhoff LM, Zhang W, Kipper J, Devos D, Suprapto A, Karni-Schmidt O, Williams R, Chait BT, Rout MP, Sali A. Determining the architectures of macromolecular assemblies. Nature 2007; 450: 683-94. google scholar
  • 12. Alber F, Dokudovskaya S, Veenhoff LM, Zhang W, Kipper J, Devos D, Suprapto A, Karni-Schmidt O, Williams R, Chait BT, Sali A, Rout MP. The molecular architecture of the nuclear pore complex. Nature 2007; 450: 695-701. google scholar
  • 13. Suntharalingam M, Wente SR. Peering through the pore: nuclear pore complex structure, assembly, and function. Dev Cell 2003; 4: 775-89. google scholar
  • 14. Macara IG. Transport into and out of the nucleus. Microbiol Mol Biol Rev 2001; 65: 570-94. google scholar
  • 15. Konuk HB, Ergüden B. Phenolic -OH group is crucial for the anti-fungal activity of terpenoids via disruption of cell membrane in-tegrity. Folia Microbiololica 2020; 65: 775-83. google scholar
  • 16. Sikorski RS, Hieter P. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomy-ces cerevisiae. Genetics 1989; 122: 9-27. google scholar
  • 17. Madrid AS, Mancuso J, Cande WZ, Weis K. The role of the integral membrane nucleoporins Ndc1p and Pom152p in nuclear pore complex assembly and function. J Cell Biol 2006; 173: 361-71. google scholar
  • 18. Erguden B. Saccharomyces cerevisiae Outer and Inner Membranes are Compromised upon Benzyl Alcohol Treatment. Int J Memb Sci Tech 2021; 8: 35-9. google scholar
  • 19. Thaller DJ, Lusk CP. Fantastic nuclear envelope herniations and where to find them. Biochem Soc Trans 2018; 46: 877-89. google scholar
  • 20. Meseroll RA, Cohen-Fix O. The Malleable Nature of the Budding Yeast Nuclear Envelope: Flares, Fusion, and Fenestrations. J Cell Physiol 2016; 231: 2353-60. google scholar
  • 21. Brown JT, Alexandra JH, Christopher MW, Belanger KD. Character-ization of nuclear pore complex targeting domains in Pom152 in Saccharomyces cerevisiae. Biology Open 2021; 10: bio057661. google scholar
  • 22. Gilbert W, Siebel CW, Guthrie C. Phosphorylation by Sky1p pro-motes Npl3p shuttling and mRNA dissociation. RNA 2001; 7: 30213. google scholar
  • 23. Sanchez NS, Königsberg M. Using Yeast to Easily Determine Mito-chondrial Functionality with 1-(4,5-Dimethylthiazol-2-yl)-3,5-di-phenyltetrazolium Bromide (MTT) Assay. Biochem Mol Biol Edu 2006; 34: 209-12. google scholar
  • 24. Sezen B. Reduction of Saccharomyces cerevisiae Pom34 protein level by SESA network is related to membrane lipid composition. FEMS Yeast Research 2015; 15: fov089. google scholar
  • 25. Frey S, Richter RP, Gorlich D. FG-rich repeats of nuclear pore pro-teins form a three-dimensional meshwork with hydrogel-like properties. Science 2006; 314: 815-17. google scholar
  • 26. Ribbeck K, Gorlich D. The permeability barrier of nuclear pore complexes appears to operate via hydrophobic exclusion. EMBO J 2002; 21: 2664-71. google scholar
  • 27. Ribbeck K, Gorlich D. Kinetic analysis of translocation through nu-clear pore complexes. EMBO J 2001; 20: 1320-30. google scholar
  • 28. Takahashi U, Hamada K, Iwahashi H. Critical Damage to the Cellu-lar Organelles of Saccharomyces cerevisiae Under Sublethal Condi-tions Upon High Pressure Carbon Dioxide Treatment. High Pres-sure Res 2019; 39: 273-9. google scholar

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APA

Ergüden, B. (2022). Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells. European Journal of Biology, 81(1), 26-30. https://doi.org/10.26650/EurJBiol.2022.1058174


AMA

Ergüden B. Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells. European Journal of Biology. 2022;81(1):26-30. https://doi.org/10.26650/EurJBiol.2022.1058174


ABNT

Ergüden, B. Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells. European Journal of Biology, [Publisher Location], v. 81, n. 1, p. 26-30, 2022.


Chicago: Author-Date Style

Ergüden, Bengü,. 2022. “Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells.” European Journal of Biology 81, no. 1: 26-30. https://doi.org/10.26650/EurJBiol.2022.1058174


Chicago: Humanities Style

Ergüden, Bengü,. Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells.” European Journal of Biology 81, no. 1 (May. 2024): 26-30. https://doi.org/10.26650/EurJBiol.2022.1058174


Harvard: Australian Style

Ergüden, B 2022, 'Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells', European Journal of Biology, vol. 81, no. 1, pp. 26-30, viewed 4 May. 2024, https://doi.org/10.26650/EurJBiol.2022.1058174


Harvard: Author-Date Style

Ergüden, B. (2022) ‘Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells’, European Journal of Biology, 81(1), pp. 26-30. https://doi.org/10.26650/EurJBiol.2022.1058174 (4 May. 2024).


MLA

Ergüden, Bengü,. Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells.” European Journal of Biology, vol. 81, no. 1, 2022, pp. 26-30. [Database Container], https://doi.org/10.26650/EurJBiol.2022.1058174


Vancouver

Ergüden B. Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells. European Journal of Biology [Internet]. 4 May. 2024 [cited 4 May. 2024];81(1):26-30. Available from: https://doi.org/10.26650/EurJBiol.2022.1058174 doi: 10.26650/EurJBiol.2022.1058174


ISNAD

Ergüden, Bengü. Benzyl Alcohol Increases Diffusion Limit of Nuclear Membrane in Saccharomyces cerevisiae Cells”. European Journal of Biology 81/1 (May. 2024): 26-30. https://doi.org/10.26650/EurJBiol.2022.1058174



TIMELINE


Submitted15.01.2022
Accepted05.04.2022
Published Online29.04.2022

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